Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-548n in SMCL Lung Bhattacharjee Cluster 22 Table contains all genes in the SMCL Lung Bhattacharjee cluster number 22. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548n 23019 CNOT1 CCR4-NOT transcription complex, subunit 1 [Source:HGNC Symbol;Acc:7877] zzz999 3178 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:5031] zzz999 10989 IMMT inner membrane protein, mitochondrial [Source:HGNC Symbol;Acc:6047] zzz999 91746 YTHDC1 YTH domain containing 1 [Source:HGNC Symbol;Acc:30626] T 9112 MTA1 metastasis associated 1 [Source:HGNC Symbol;Acc:7410] P T 4607 MYBPC3 myosin binding protein C, cardiac [Source:HGNC Symbol;Acc:7551] zzz999 3516 RBPJ recombination signal binding protein for immunoglobulin kappa J region [Source:HGNC Symbol;Acc:5724] zzz999 3054 HCFC1 host cell factor C1 (VP16-accessory protein) [Source:HGNC Symbol;Acc:4839] T 10079 ATP9A ATPase, class II, type 9A [Source:HGNC Symbol;Acc:13540] T 10572 SIVA1 SIVA1, apoptosis-inducing factor [Source:HGNC Symbol;Acc:17712] zzz999 5905 RANGAP1 Ran GTPase activating protein 1 [Source:HGNC Symbol;Acc:9854] zzz999 5711 PSMD5 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 [Source:HGNC Symbol;Acc:9563] T 2026 ENO2 enolase 2 (gamma, neuronal) [Source:HGNC Symbol;Acc:3353] zzz999 4898 NRD1 nardilysin (N-arginine dibasic convertase) [Source:HGNC Symbol;Acc:7995] zzz999 4190 MDH1 malate dehydrogenase 1, NAD (soluble) [Source:HGNC Symbol;Acc:6970] zzz999 3181 HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 [Source:HGNC Symbol;Acc:5033] P T 2079 ERH enhancer of rudimentary homolog (Drosophila) [Source:HGNC Symbol;Acc:3447] zzz999 3066 HDAC2 histone deacetylase 2 [Source:HGNC Symbol;Acc:4853] T 8842 PROM1 prominin 1 [Source:HGNC Symbol;Acc:9454] T 10762 NUP50 nucleoporin 50kDa [Source:HGNC Symbol;Acc:8065] T 10923 SUB1 SUB1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:19985] P T 7514 XPO1 exportin 1 (CRM1 homolog, yeast) [Source:HGNC Symbol;Acc:12825] zzz999 6175 RPLP0 ribosomal protein, large, P0 [Source:HGNC Symbol;Acc:10371] zzz999 3146 HMGB1 high mobility group box 1 [Source:HGNC Symbol;Acc:4983] T 9555 H2AFY H2A histone family, member Y [Source:HGNC Symbol;Acc:4740] P T 5901 RAN RAN, member RAS oncogene family [Source:HGNC Symbol;Acc:9846] zzz999 4670 HNRNPM heterogeneous nuclear ribonucleoprotein M [Source:HGNC Symbol;Acc:5046] P T 6594 SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:HGNC Symbol;Acc:11097] zzz999 3148 HMGB2 high mobility group box 2 [Source:HGNC Symbol;Acc:5000] P T 3670 ISL1 ISL LIM homeobox 1 [Source:HGNC Symbol;Acc:6132] zzz999 701 BUB1B budding uninhibited by benzimidazoles 1 homolog beta (yeast) [Source:HGNC Symbol;Acc:1149] T 1660 DHX9 DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Source:HGNC Symbol;Acc:2750] zzz999 6626 SNRPA small nuclear ribonucleoprotein polypeptide A [Source:HGNC Symbol;Acc:11151] zzz999 2186 BPTF bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:3581] P T 4234 METTL1 methyltransferase like 1 [Source:HGNC Symbol;Acc:7030] zzz999 11013 TMSB15A thymosin beta 15a [Source:HGNC Symbol;Acc:30744] zzz999 3015 H2AFZ H2A histone family, member Z [Source:HGNC Symbol;Acc:4741] zzz999 11143 MYST2 MYST histone acetyltransferase 2 [Source:HGNC Symbol;Acc:17016] T 5685 PSMA4 proteasome (prosome, macropain) subunit, alpha type, 4 [Source:HGNC Symbol;Acc:9533] T 6746 SSR2 signal sequence receptor, beta (translocon-associated protein beta) [Source:HGNC Symbol;Acc:11324] zzz999 6727 SRP14 signal recognition particle 14kDa (homologous Alu RNA binding protein) [Source:HGNC Symbol;Acc:11299] zzz999 9276 COPB2 coatomer protein complex, subunit beta 2 (beta prime) [Source:HGNC Symbol;Acc:2232] zzz999 23070 FTSJD2 FtsJ methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:21077] zzz999 9874 TLK1 tousled-like kinase 1 [Source:HGNC Symbol;Acc:11841] T 26284 ERAL1 Era G-protein-like 1 (E. coli) [Source:HGNC Symbol;Acc:3424] zzz999 27336 HTATSF1 HIV-1 Tat specific factor 1 [Source:HGNC Symbol;Acc:5276] zzz999 11243 PMF1 polyamine-modulated factor 1 [Source:HGNC Symbol;Acc:9112] zzz999 23165 NUP205 nucleoporin 205kDa [Source:HGNC Symbol;Acc:18658] T 3150 HMGN1 high mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:4984] zzz999 10657 KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 [Source:HGNC Symbol;Acc:18116] zzz999 7516 XRCC2 X-ray repair complementing defective repair in Chinese hamster cells 2 [Source:HGNC Symbol;Acc:12829] T 5528 PPP2R5D protein phosphatase 2, regulatory subunit B', delta [Source:HGNC Symbol;Acc:9312] zzz999 4591 TRIM37 tripartite motif containing 37 [Source:HGNC Symbol;Acc:7523] P T 4869 NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) [Source:HGNC Symbol;Acc:7910] zzz999 23435 TARDBP TAR DNA binding protein [Source:HGNC Symbol;Acc:11571] P T 6427 SRSF2 serine/arginine-rich splicing factor 2 [Source:HGNC Symbol;Acc:10783] T 6659 SOX4 SRY (sex determining region Y)-box 4 [Source:HGNC Symbol;Acc:11200] T 11318 GPR182 G protein-coupled receptor 182 [Source:HGNC Symbol;Acc:13708] zzz999 6938 TCF12 transcription factor 12 [Source:HGNC Symbol;Acc:11623] P T 178 AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase [Source:HGNC Symbol;Acc:321] zzz999 5684 PSMA3 proteasome (prosome, macropain) subunit, alpha type, 3 [Source:HGNC Symbol;Acc:9532] zzz999 8125 ANP32A acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:HGNC Symbol;Acc:13233] zzz999 22883 CLSTN1 calsyntenin 1 [Source:HGNC Symbol;Acc:17447] zzz999 11171 STRAP serine/threonine kinase receptor associated protein [Source:HGNC Symbol;Acc:30796] zzz999 8546 AP3B1 adaptor-related protein complex 3, beta 1 subunit [Source:HGNC Symbol;Acc:566] T 1000 CDH2 cadherin 2, type 1, N-cadherin (neuronal) [Source:HGNC Symbol;Acc:1759] zzz999 57498 KIDINS220 kinase D-interacting substrate, 220kDa [Source:HGNC Symbol;Acc:29508] T 9877 ZC3H11A zinc finger CCCH-type containing 11A [Source:HGNC Symbol;Acc:29093] zzz999 23152 CIC capicua homolog (Drosophila) [Source:HGNC Symbol;Acc:14214] zzz999 5725 PTBP1 polypyrimidine tract binding protein 1 [Source:HGNC Symbol;Acc:9583] P T 3211 HOXB1 homeobox B1 [Source:HGNC Symbol;Acc:5111] zzz999 3191 HNRNPL heterogeneous nuclear ribonucleoprotein L [Source:HGNC Symbol;Acc:5045] T 10147 SUGP2 SURP and G patch domain containing 2 [Source:HGNC Symbol;Acc:18641] zzz999 3151 HMGN2 high mobility group nucleosomal binding domain 2 [Source:HGNC Symbol;Acc:4986] P T 9638 FEZ1 fasciculation and elongation protein zeta 1 (zygin I) [Source:HGNC Symbol;Acc:3659] zzz999 9295 SRSF11 serine/arginine-rich splicing factor 11 [Source:HGNC Symbol;Acc:10782] P T 10236 HNRNPR heterogeneous nuclear ribonucleoprotein R [Source:HGNC Symbol;Acc:5047] zzz999 3182 HNRNPAB heterogeneous nuclear ribonucleoprotein A/B [Source:HGNC Symbol;Acc:5034] P T 7267 TTC3 tetratricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:12393] T 25771 TBC1D22A TBC1 domain family, member 22A [Source:HGNC Symbol;Acc:1309] zzz999 9097 USP14 ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) [Source:HGNC Symbol;Acc:12612] zzz999 664 BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 [Source:HGNC Symbol;Acc:1084] zzz999 6421 SFPQ splicing factor proline/glutamine-rich [Source:HGNC Symbol;Acc:10774] T 4801 NFYB nuclear transcription factor Y, beta [Source:HGNC Symbol;Acc:7805] P T 51747 LUC7L3 LUC7-like 3 (S. cerevisiae) [Source:HGNC Symbol;Acc:24309] P T 27316 RBMX RNA binding motif protein, X-linked [Source:HGNC Symbol;Acc:9910] P T 134728 IRAK1BP1 interleukin-1 receptor-associated kinase 1 binding protein 1 [Source:HGNC Symbol;Acc:17368] P T 399665 FAM102A family with sequence similarity 102, member A [Source:HGNC Symbol;Acc:31419] zzz999 7020 TFAP2A transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) [Source:HGNC Symbol;Acc:11742] zzz999 7265 TTC1 tetratricopeptide repeat domain 1 [Source:HGNC Symbol;Acc:12391] T 23173 METAP1 methionyl aminopeptidase 1 [Source:HGNC Symbol;Acc:15789] P T 955 ENTPD6 ectonucleoside triphosphate diphosphohydrolase 6 (putative) [Source:HGNC Symbol;Acc:3368] zzz999 9733 SART3 squamous cell carcinoma antigen recognized by T cells 3 [Source:HGNC Symbol;Acc:16860] zzz999 5297 PI4KA phosphatidylinositol 4-kinase, catalytic, alpha [Source:HGNC Symbol;Acc:8983] zzz999 3183 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) [Source:HGNC Symbol;Acc:5035] T 9315 C5orf13 chromosome 5 open reading frame 13 [Source:HGNC Symbol;Acc:16834] T 22809 ATF5 activating transcription factor 5 [Source:HGNC Symbol;Acc:790] zzz999 8874 ARHGEF7 Rho guanine nucleotide exchange factor (GEF) 7 [Source:HGNC Symbol;Acc:15607] P T 1673 DEFB4B defensin, beta 4B [Source:HGNC Symbol;Acc:30193] zzz999 158 ADSL adenylosuccinate lyase [Source:HGNC Symbol;Acc:291] zzz999 6434 TRA2B transformer 2 beta homolog (Drosophila) [Source:HGNC Symbol;Acc:10781] P T 6729 SRP54 signal recognition particle 54kDa [Source:HGNC Symbol;Acc:11301] zzz999 54386 TERF2IP telomeric repeat binding factor 2, interacting protein [Source:HGNC Symbol;Acc:19246] zzz999

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